Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF04983 across 1 genomes (restricted to LSARM) · 69 ms.

Species with hits:← all speciesLSARM 7
SpeciesGene IDPfam termMatchSourceBrowser
LSARMENSAPQP00000011787.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000023622.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000011809.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000025537.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000011764.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000011838.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
LSARMENSAPQP00000023595.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse

TOP