Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04997 across 1 genomes (restricted to Hemicorallium imperiale) · 7 ms.

Species with hits:← all speciesHemicorallium imperiale 5
SpeciesGene IDPfam termMatchSourceBrowser
Hemicorallium imperialeevm.model.Contig133.49PF04997RNA polymerase Rpb1, domain 1InterproscanJBrowse
Hemicorallium imperialeevm.model.Chr02.503PF04997RNA polymerase Rpb1, domain 1InterproscanJBrowse
Hemicorallium imperialeevm.model.Chr01.1195PF04997RNA polymerase Rpb1, domain 1InterproscanJBrowse
Hemicorallium imperialeevm.model.Contig128.60PF04997RNA polymerase Rpb1, domain 1InterproscanJBrowse
Hemicorallium imperialeevm.model.Chr19.220PF04997RNA polymerase Rpb1, domain 1InterproscanJBrowse

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