Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF05047 across 1 genomes (restricted to Pocillopora acuta) · 1 ms.

Species with hits:← all speciesPocillopora acuta 4
SpeciesGene IDPfam termMatchSourceBrowser
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g23870.t1PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain InterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g23869.t1PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain InterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g28116.t1PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain InterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___TS.g19593.t1bPF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain InterproscanJBrowse

TOP