Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF06470 across 1 genomes (restricted to ATENU) · 52 ms.

Species with hits:← all species ATENU 6

Species	Gene ID	Pfam term	Match	Source	Browser
ATENU	aten_s0258.g6.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse
ATENU	aten_s0011.g162.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse
ATENU	aten_s0049.g55.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse
ATENU	aten_s0098.g40.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse
ATENU	aten_s0229.g3.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse
ATENU	aten_s0079.g75.t1	PF06470	SMC proteins Flexible Hinge Domain	Interproscan	JBrowse