Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF08242 across 1 genomes (restricted to AAURI2) · 54 ms.

Species with hits:← all speciesAAURI2 8
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold2954.g4.t1PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold71.g25.t1PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold71.g25.t1PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold922.g3.t1PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold84.g25.t1PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold71.g25.t2PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold71.g25.t2PF08242Methyltransferase domainInterproscanJBrowse
AAURI2scaffold10.g40.t1PF08242Methyltransferase domainInterproscanJBrowse

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