Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF10469 across 1 genomes (restricted to PSINE2) · 105 ms.

Species with hits:← all speciesPSINE2 8
SpeciesGene IDPfam termMatchSourceBrowser
PSINE2evm.model.contig_63050.3PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_16358.2PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_36919.1PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_90378.2PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_18093.11PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_18093.3PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_18093.10PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse
PSINE2evm.model.contig_80462.2PF10469AKAP7 2'5' RNA ligase-like domainInterproscanJBrowse

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