Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF12171 across 1 genomes (restricted to CCRUX) · 36 ms.

Species with hits:← all species CCRUX 7

Species	Gene ID	Pfam term	Match	Source	Browser
CCRUX	g181.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g603.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g910.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g229.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g1063.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g855.t1	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse
CCRUX	g229.t2	PF12171	Zinc-finger double-stranded RNA-binding	Interproscan	JBrowse