Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF12799 across 1 genomes (restricted to AAURI2) · 57 ms.

Species with hits:← all speciesAAURI2 14
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold494.g10.t3PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold360.g16.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold200.g13.t2PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold230.g30.t3PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold382.g12.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold1272.g6.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold230.g30.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold1101.g2.t3PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold86.g16.t2PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold86.g16.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold200.g13.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold286.g15.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold611.g15.t1PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse
AAURI2scaffold86.g16.t3PF12799Leucine Rich repeats (2 copies)InterproscanJBrowse

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