Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF13176 across 1 genomes (restricted to AAURI2) · 42 ms.

Species with hits:← all speciesAAURI2 6
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold254.g12.t2PF13176Tetratricopeptide repeatInterproscanJBrowse
AAURI2scaffold3294.g1.t1PF13176Tetratricopeptide repeatInterproscanJBrowse
AAURI2scaffold853.g7.t2PF13176Tetratricopeptide repeatInterproscanJBrowse
AAURI2scaffold10.g44.t1PF13176Tetratricopeptide repeatInterproscanJBrowse
AAURI2scaffold853.g7.t1PF13176Tetratricopeptide repeatInterproscanJBrowse
AAURI2scaffold254.g12.t1PF13176Tetratricopeptide repeatInterproscanJBrowse

TOP