Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 23 gene–annotation pairs matching PF13445 across 1 genomes (restricted to AAURI1) · 58 ms.

Species with hits:← all speciesAAURI1 23
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold17.g9.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold179.g26.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold73.g45.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold812.g1.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold69.g61.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold200.g28.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold11.g58.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold130.g48.t4PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold44.g65.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold4.g148.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold251.g34.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold31.g53.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold31.g53.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold146.g22.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold403.g17.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold16.g45.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold4.g148.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold17.g9.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold130.g48.t3PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold69.g61.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold73.g45.t2PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold44.g65.t1PF13445RING-type zinc-fingerInterproscanJBrowse
AAURI1scaffold80.g52.t1PF13445RING-type zinc-fingerInterproscanJBrowse

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