Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 28 gene–annotation pairs matching PF13639 across 1 genomes (restricted to AAURI1) · 81 ms.

Species with hits:← all speciesAAURI1 28
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold82.g73.t2PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold62.g15.t3PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold13.g74.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold258.g13.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold72.g27.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold33.g42.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold211.g15.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold498.g1.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold62.g15.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold62.g15.t2PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold13.g14.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold9.g12.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold130.g48.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold8.g162.t2PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold174.g18.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold5.g73.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold149.g17.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold77.g10.t3PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold82.g4.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold445.g6.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold265.g30.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold445.g6.t2PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold8.g162.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold116.g35.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold116.g35.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold201.g27.t1PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold82.g83.t2PF13639Ring finger domainInterproscanJBrowse
AAURI1scaffold14.g30.t1PF13639Ring finger domainInterproscanJBrowse

TOP