Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF13893 across 1 genomes (restricted to Actinoscyphia liui) · 2 ms.

Species with hits:← all species Actinoscyphia liui 8

Species	Gene ID	Pfam term	Match	Source	Browser
Actinoscyphia liui	gene06567.t1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene06567.t1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene23599.t2	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene23599.t3	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene06567.t2	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene06567.t2	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene19840.t1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
Actinoscyphia liui	gene23599.t1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse