Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF13893 across 1 genomes (restricted to CMOSA) · 30 ms.

Species with hits:← all species CMOSA 7

Species	Gene ID	Pfam term	Match	Source	Browser
CMOSA	ENSSJYP00000004123.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000004123.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000002103.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000004108.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000002121.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000002061.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
CMOSA	ENSSJYP00000004113.1	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse