Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF13893 across 1 genomes (restricted to CSALA) · 91 ms.

Species with hits:← all speciesCSALA 7
SpeciesGene IDPfam termMatchSourceBrowser
CSALAENSOFVP00000011488.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000010115.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000025970.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000017799.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000011501.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000010121.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
CSALAENSOFVP00000010121.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse

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