Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF13893 across 1 genomes (restricted to HOCTO) · 85 ms.

Species with hits:← all speciesHOCTO 6
SpeciesGene IDPfam termMatchSourceBrowser
HOCTOg11236.t1.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
HOCTOBRAKERHOCP00005004619.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
HOCTOBRAKERHOCP00005005603.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
HOCTOg11238.t1.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
HOCTOBRAKERHOCP00005011845.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse
HOCTOg18391.t1.1PF13893RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)InterproscanJBrowse

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