Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF13898 across 1 genomes (restricted to AMEDI) · 63 ms.

Species with hits:← all speciesAMEDI 6
SpeciesGene IDPfam termMatchSourceBrowser
AMEDIENSQPTP00000044945.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse
AMEDIENSQPTP00000006010.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse
AMEDIENSQPTP00000038413.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse
AMEDIENSQPTP00000077431.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse
AMEDIENSQPTP00000028615.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse
AMEDIENSQPTP00000068782.1PF13898Deubiquitinating enzyme MINDY-3/4, conserved domainInterproscanJBrowse

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