Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF16878 across 1 genomes (restricted to AMEDI) · 60 ms.

Species with hits:← all speciesAMEDI 12
SpeciesGene IDPfam termMatchSourceBrowser
AMEDIENSQPTP00000039240.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000077589.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000053723.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000013139.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000003312.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000041028.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000043243.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000006029.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000043064.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000003069.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000000307.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse
AMEDIENSQPTP00000040444.1PF16878Transcriptional regulator, SIX1, N-terminal SD domainInterproscanJBrowse

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