Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF17820 across 1 genomes (restricted to AAURI2) · 28 ms.

Species with hits:← all speciesAAURI2 11
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold2246.g4.t1PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold263.g1.t1PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold775.g2.t1PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold232.g3.t1PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold2246.g4.t2PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold2246.g4.t3PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold775.g2.t2PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold232.g3.t3PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold2246.g4.t4PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold94.g20.t1PF17820PDZ domainInterproscanJBrowse
AAURI2scaffold315.g18.t1PF17820PDZ domainInterproscanJBrowse

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