Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF17820 across 1 genomes (restricted to CCRUX) · 16 ms.

Species with hits:← all speciesCCRUX 12
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg223.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg1049.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg223.t2PF17820PDZ domainInterproscanJBrowse
CCRUXg1168.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg1168.t2PF17820PDZ domainInterproscanJBrowse
CCRUXg1238.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg1143.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg223.t3PF17820PDZ domainInterproscanJBrowse
CCRUXg293.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg1467.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg539.t1PF17820PDZ domainInterproscanJBrowse
CCRUXg618.t1PF17820PDZ domainInterproscanJBrowse

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