Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF17846 across 1 genomes (restricted to Scolanthus callimorphus) · 9 ms.

Species with hits:← all speciesScolanthus callimorphus 7
SpeciesGene IDPfam termMatchSourceBrowser
Scolanthus callimorphusNY_Scal100_v1.9790.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.9792.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.21988.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.21982.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.33675.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.33675.1PF17846Xrn1 helical domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.21983.1PF17846Xrn1 helical domainInterproscanJBrowse

TOP