Transcription Factors in Acropora loripes

Transcription factors (TFs) of Acropora loripes are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

Transcription Factor Families
Fork_head(28)zf-CCCH(18)ZBTB(97)P53(3)RFX(6)
MYB(25)zf-C2H2(89)bHLH(68)HMG(34)ESR-like(18)
Miscellaneous(18)NGFIB-like(17)RXR-like(14)SF-like(17)THR-like(16)
GCNF-like(9)Homeobox(115)THAP(110)PAX(30)zf-LITAF-like(3)
TF_bZIP(31)CUT(4)DM(7)T-box(12)zf-MIZ(3)
MBD(3)Tub(1)zf-BED(3)CSD(5)MH1(7)
ARID(5)zf-GATA(3)CP2(3)ETS(16)HTH(2)
GTF2I(1)zf-C2HC(4)HSF(4)CSRNP_N(3)Nrf1(2)
CSL(1)SRF(5)STAT(2)Pou(6)CBF(1)
HMGA(1)TEA(1)SAND(2)IRF(4)AP-2(2)
CG-1(2)zf-GAGA(3)COE(1)E2F(4)AF-4(1)
Runt(1)NDT80_PhoG(1)TSC22(5)RHD(3)LRRFIP(2)
zf-NF-X1(1)NF-YA(1)GCFC(1)NCU-G1(1)DACH(1)
PC4(1)
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