Transcription Factors in Cassiopea xamachana

Transcription factors (TFs) of Cassiopea xamachana are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

Transcription Factor Families
zf-C2H2(87)ZBTB(42)AF-4(1)bHLH(29)HMG(24)
THAP(30)TF_bZIP(16)ETS(10)Homeobox(41)PC4(1)
zf-BED(6)MYB(17)ESR-like(6)Miscellaneous(6)RXR-like(7)
THR-like(4)GCNF-like(5)E2F(5)ARID(4)Pou(4)
zf-GATA(3)Fork_head(11)zf-MIZ(2)CSD(6)P53(2)
T-box(5)zf-CCCH(10)Tub(1)zf-NF-X1(1)MBD(5)
HTH(3)zf-LITAF-like(2)CP2(1)HSF(2)RFX(2)
CSL(1)zf-C2HC(2)GTF2I(1)NGFIB-like(3)SF-like(5)
NF-YA(1)TSC22(1)RHD(1)MH1(4)IRF(2)
AP-2(2)TEA(1)STAT(1)Runt(1)PAX(1)
COE(1)CUT(1)zf-GAGA(1)GCFC(1)SRF(1)
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