Transcription Factors Family in Aurelia coerulea

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>HMG

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
evm.model.ptg000002l.307PF00505HMG_box domainHMG (high mobility group) boxhypothetical protein pdam_00006253 [Pocillopora damicornis]Jbrowse
evm.model.ptg000003l.1124PF00505HMG_box domainHMG (high mobility group) boxPREDICTED: acidic repeat-containing protein-like [Saccoglossus kowalevskii]Jbrowse
evm.model.ptg000003l.1411PF00505HMG_box domainHMG (high mobility group) boxnucleolar transcription factor 1 isoform X2 [Parambassis ranga]Jbrowse
evm.model.ptg000003l.202PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group B protein 3 [Hydra vulgaris]Jbrowse
evm.model.ptg000006l.407PF00505HMG_box domainHMG (high mobility group) boxSoxF2 [Hydractinia echinata]Jbrowse
evm.model.ptg000009l.575PF00505HMG_box domainHMG (high mobility group) boxFACT complex subunit SSRP1-like [Orbicella faveolata]Jbrowse
evm.model.ptg000024l.768PF00505HMG_box domainHMG (high mobility group) boxTCF [Hydractinia echinata]Jbrowse
evm.model.ptg000024l.781PF00505HMG_box domainHMG (high mobility group) boxHypothetical predicted protein [Paramuricea clavata]Jbrowse
evm.model.ptg000027l.130PF00505HMG_box domainHMG (high mobility group) boxSoxE1 [Hydractinia echinata]Jbrowse
evm.model.ptg000028l.1069PF00505HMG_box domainHMG (high mobility group) boxSoxF1 [Hydractinia echinata]Jbrowse
evm.model.ptg000031l.268PF00505HMG_box domainHMG (high mobility group) boxhypothetical protein XENTR_v10012500 [Xenopus tropicalis]Jbrowse
evm.model.ptg000049l.55PF00505HMG_box domainHMG (high mobility group) boxmyelin transcription factor 1-like isoform X2 [Actinia tenebrosa]Jbrowse
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