Transcription Factors Family in Cassiopea xamachana

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>HMG

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
Cxam_g10096.t1PF00505HMG_box domainHMG (high mobility group) boxsodium leak channel NALCN [Hydra vulgaris]Jbrowse
Cxam_g10685.t1PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group B protein 3 [Hydra vulgaris]Jbrowse
Cxam_g12234.t1PF00505HMG_box domainHMG (high mobility group) boxuncharacterized protein LOC100201739 isoform X5 [Hydra vulgaris]Jbrowse
Cxam_g12929.t1PF00505HMG_box domainHMG (high mobility group) boxJbrowse
Cxam_g15730.t1PF00505HMG_box domainHMG (high mobility group) boxnon-histone chromosomal protein 6 [Nematostella vectensis]Jbrowse
Cxam_g16646.t1PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group protein 20A-like isoform X2 [Acropora millepora]Jbrowse
Cxam_g18397.t1PF00505HMG_box domainHMG (high mobility group) boxSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [Hydra vulgaris]Jbrowse
Cxam_g21229.t1PF00505HMG_box domainHMG (high mobility group) boxSox25 [Hydractinia echinata]Jbrowse
Cxam_g22543.t1PF00505HMG_box domainHMG (high mobility group) boxuncharacterized protein LOC100198143 isoform X3 [Hydra vulgaris]Jbrowse
Cxam_g24200.t1PF00505HMG_box domainHMG (high mobility group) boxhypothetical protein FOCC_FOCC009465 [Frankliniella occidentalis]Jbrowse
Cxam_g28824.t1PF00505HMG_box domainHMG (high mobility group) boxunnamed protein product [Pocillopora meandrina]Jbrowse
Cxam_g29313.t1PF00505HMG_box domainHMG (high mobility group) boxSoxE1 [Hydractinia echinata]Jbrowse
Cxam_g30912.t1PF00505HMG_box domainHMG (high mobility group) boxSoxC1 [Hydractinia echinata]Jbrowse
Cxam_g368.t1PF00505HMG_box domainHMG (high mobility group) boxSoxF2 [Hydractinia echinata]Jbrowse
Cxam_g4035.t1PF00505HMG_box domainHMG (high mobility group) boxSox22 [Hydractinia echinata]Jbrowse
Cxam_g4056.t1PF00505HMG_box domainHMG (high mobility group) boxSoxE2, partial [Hydractinia echinata]Jbrowse
Cxam_g5647.t1PF00505HMG_box domainHMG (high mobility group) boxSox23 [Hydractinia echinata]Jbrowse
Cxam_g7771.t1PF00505HMG_box domainHMG (high mobility group) boxtranscription factor Sox-21 [Hydra vulgaris]Jbrowse
Cxam_g7874.t1PF00505HMG_box domainHMG (high mobility group) boxFACT complex subunit SSRP1-like isoform X2 [Actinia tenebrosa]Jbrowse
Cxam_g8549.t1PF00505HMG_box domainHMG (high mobility group) boxTCF [Hydractinia echinata]Jbrowse
Cxam_g8549.t2PF00505HMG_box domainHMG (high mobility group) boxTCF [Hydractinia echinata]Jbrowse
Cxam_g8754.t1PF00505HMG_box domainHMG (high mobility group) boxsex-determining region Y protein-like [Dendronephthya gigantea]Jbrowse
Cxam_g9164.t1PF00505HMG_box domainHMG (high mobility group) boxzinc finger protein 260-like [Stylophora pistillata]Jbrowse
Cxam_g9609.t1PF00505HMG_box domainHMG (high mobility group) boxnon-histone chromosomal protein 6 [Nematostella vectensis]Jbrowse
TOP