Transcription Factors Family in Chrysaora quinquecirrha

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>HMG

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
evm.model.HiC_scaffold_1.117PF00505HMG_box domainHMG (high mobility group) boxtyrosine-protein kinase Src42A [Halyomorpha halys]Jbrowse
evm.model.HiC_scaffold_1.167PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group B protein 3 isoform X2 [Exaiptasia diaphana]Jbrowse
evm.model.HiC_scaffold_10.416PF00505HMG_box domainHMG (high mobility group) boxTCF [Hydractinia echinata]Jbrowse
evm.model.HiC_scaffold_197.30PF00505HMG_box domainHMG (high mobility group) boxprotein capicua homolog [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_2.391PF00505HMG_box domainHMG (high mobility group) boxSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_214.4PF00505HMG_box domainHMG (high mobility group) boxATP-dependent RNA helicase DDX3X [Pteropus alecto]Jbrowse
evm.model.HiC_scaffold_23.425PF00505HMG_box domainHMG (high mobility group) boxtranscription factor Sox-7 [Lingula anatina]Jbrowse
evm.model.HiC_scaffold_26.385PF00505HMG_box domainHMG (high mobility group) boxuncharacterized protein LOC100201739 isoform X5 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_26.404PF00505HMG_box domainHMG (high mobility group) boxuncharacterized protein LOC100201739 isoform X4 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_26.411PF00505HMG_box domainHMG (high mobility group) boxuncharacterized protein LOC100201739 isoform X5 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_27.355PF00505HMG_box domainHMG (high mobility group) boxSox22 [Hydractinia echinata]Jbrowse
evm.model.HiC_scaffold_29.1732PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group B protein 3 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_29.1743PF00505HMG_box domainHMG (high mobility group) boxhigh mobility group B protein 3 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_31.465PF00505HMG_box domainHMG (high mobility group) boxunnamed protein product [Porites lobata]Jbrowse
evm.model.HiC_scaffold_32.738PF00505HMG_box domainHMG (high mobility group) boxtranscription factor A, mitochondrial isoform X2 [Tachysurus fulvidraco]Jbrowse
evm.model.HiC_scaffold_33.21PF00505HMG_box domainHMG (high mobility group) boxtranscription factor A, mitochondrial isoform X2 [Tachysurus fulvidraco]Jbrowse
evm.model.HiC_scaffold_34.74PF00505HMG_box domainHMG (high mobility group) boxunnamed protein product, partial [Pocillopora meandrina]Jbrowse
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