Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.
| Gene | Pfam/Self-build | DNA Binding Domain | Full name | Description | Jbrowse |
|---|---|---|---|---|---|
| HOLI00006.G14702 | PF00046 | Homeobox | Homeodomain | short stature homeobox protein [Hydra vulgaris] | Jbrowse |
| HOLI00039.G13747 | PF00046 | Homeobox | Homeodomain | pituitary homeobox 1 [Hydra vulgaris] | Jbrowse |
| HOLI00072.G39215 | PF00046 | Homeobox | Homeodomain | POU domain, class 4, transcription factor 2 isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI00076.G48503 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC105844565 isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI00121.G59795 | PF00046 | Homeobox | Homeodomain | homeobox protein SIX6 isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI00144.G58548 | PF00046 | Homeobox | Homeodomain | diencephalon/mesencephalon homeobox protein 1-A isoform X2 [Hydra vulgaris] | Jbrowse |
| HOLI00179.G36810 | PF00046 | Homeobox | Homeodomain | LIM/homeobox protein Lhx5 isoform X2 [Hydra vulgaris] | Jbrowse |
| HOLI00253.G32623 | PF00046 | Homeobox | Homeodomain | homeobox protein Hox-C6a-like [Hydra vulgaris] | Jbrowse |
| HOLI00290.G12121 | PF00046 | Homeobox | Homeodomain | homeobox protein OTX2-like isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI00341.G43895 | PF00046 | Homeobox | Homeodomain | homeobox protein ceh-9 [Hydra vulgaris] | Jbrowse |
| HOLI00443.G34839 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC124815092 [Hydra vulgaris] | Jbrowse |
| HOLI00573.G11326 | PF00046 | Homeobox | Homeodomain | short stature homeobox protein 2 [Hydra vulgaris] | Jbrowse |
| HOLI00581.G607 | PF00046 | Homeobox | Homeodomain | homeobox protein ceh-28 [Hydra vulgaris] | Jbrowse |
| HOLI00668.G47953 | PF00046 | Homeobox | Homeodomain | homeobox protein pnx-like [Hydra vulgaris] | Jbrowse |
| HOLI00675.G48698 | PF00046 | Homeobox | Homeodomain | homeobox A1 [Hydra vulgaris] | Jbrowse |
| HOLI00678.G11838 | PF00046 | Homeobox | Homeodomain | retinal homeobox protein Rax-like [Hydra vulgaris] | Jbrowse |
| HOLI00789.G25295 | PF00046 | Homeobox | Homeodomain | pre-B-cell leukemia transcription factor 1 [Hydra vulgaris] | Jbrowse |
| HOLI00845.G34137 | PF00046 | Homeobox | Homeodomain | paired box protein Pax-3-like [Hydra vulgaris] | Jbrowse |
| HOLI00863.G6368 | PF00046 | Homeobox | Homeodomain | homeobox protein PKNOX2-like isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI00946.G57337 | PF00046 | Homeobox | Homeodomain | homeobox protein orthopedia [Hydra vulgaris] | Jbrowse |
| HOLI01082.G25310 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC124813917 [Hydra vulgaris] | Jbrowse |
| HOLI01193.G29260 | PF00046 | Homeobox | Homeodomain | homeobox protein ceh-31 [Hydra vulgaris] | Jbrowse |
| HOLI01334.G24791 | PF00046 | Homeobox | Homeodomain | NK-2 class homeobox transcription factor [Hydra vulgaris] | Jbrowse |
| HOLI01357.G28382 | PF00046 | Homeobox | Homeodomain | iroquois-class homeodomain protein IRX-2 [Hydra vulgaris] | Jbrowse |
| HOLI01486.G41715 | PF00046 | Homeobox | Homeodomain | LIM/homeobox protein Awh [Hydra vulgaris] | Jbrowse |
| HOLI01556.G35446 | PF00046 | Homeobox | Homeodomain | homeobox protein OTX1 B [Hydra vulgaris] | Jbrowse |
| HOLI01621.G55672 | PF00046 | Homeobox | Homeodomain | homeobox protein OTX1 B [Hydra vulgaris] | Jbrowse |
| HOLI01624.G39537 | PF00046 | Homeobox | Homeodomain | homeobox protein SIX1 [Hydra vulgaris] | Jbrowse |
| HOLI01682.G42613 | PF00046 | Homeobox | Homeodomain | NK1 transcription factor-related protein 1 [Hydra vulgaris] | Jbrowse |
| HOLI01707.G6764 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC101239718 [Hydra vulgaris] | Jbrowse |
| HOLI01973.G16467 | PF00046 | Homeobox | Homeodomain | aristaless-related homeobox protein [Hydra vulgaris] | Jbrowse |
| HOLI02034.G33873 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC100198319 isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI02595.G39563 | PF00046 | Homeobox | Homeodomain | uncharacterized protein LOC105844140 [Hydra vulgaris] | Jbrowse |
| HOLI02664.G29034 | PF00046 | Homeobox | Homeodomain | ALX homeobox protein 1 [Hydra vulgaris] | Jbrowse |
| HOLI02912.G43881 | PF00046 | Homeobox | Homeodomain | ALX homeobox protein 1 [Hydra vulgaris] | Jbrowse |
| HOLI03218.G701 | PF00046 | Homeobox | Homeodomain | homeobox protein Hox-C6 [Hydra vulgaris] | Jbrowse |
| HOLI03749.G23732 | PF00046 | Homeobox | Homeodomain | homeobox protein aristaless isoform X1 [Hydra vulgaris] | Jbrowse |
| HOLI04232.G56053 | PF00046 | Homeobox | Homeodomain | homeobox-leucine zipper protein ATHB-12-like [Hydra vulgaris] | Jbrowse |
| HOLI04470.G47384 | PF00046 | Homeobox | Homeodomain | homeobox protein ceh-28 [Hydra vulgaris] | Jbrowse |
| HOLI06017.G57539 | PF00046 | Homeobox | Homeodomain | homeobox-leucine zipper protein ATHB-12-like [Hydra vulgaris] | Jbrowse |
| HOLI07350.G45708 | PF00046 | Homeobox | Homeodomain | LIM/homeobox protein Awh [Hydra vulgaris] | Jbrowse |
| HOLI07410.G31485 | PF00046 | Homeobox | Homeodomain | paired mesoderm homeobox protein 2 [Hydra vulgaris] | Jbrowse |