Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.
| Gene | Pfam/Self-build | DNA Binding Domain | Full name | Description | Jbrowse |
|---|---|---|---|---|---|
| evm.model.Ap1.123 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap1.187 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | COUP transcription factor 1 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap1.187.1.5f15dd04 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | COUP transcription factor 1 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap1.2995 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap11.1426 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | photoreceptor-specific nuclear receptor-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap12.56 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | retinoic acid receptor RXR-alpha-like isoform X2 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap13.1436 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | photoreceptor-specific nuclear receptor-like isoform X2 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap3.1590 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | Nuclear receptor sub 2 group F member 6 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap4.5870 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | hepatocyte nuclear factor 4-gamma-like isoform X4 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap5.2853 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | nuclear receptor subfamily 2 group C member 1-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap6.3037 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | positive regulation of rhodopsin protein expression [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap6.3039 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap8.281 | self-build | zf-C4|NGFIB-like | Nerve_Growth_Factor_IB-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
