Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.
| Gene | Pfam/Self-build | DNA Binding Domain | Full name | Description | Jbrowse |
|---|---|---|---|---|---|
| BRAKERLUSP00000004904.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | hepatocyte nuclear factor 4-gamma-like isoform X4 [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000006430.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000006710.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000009579.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | photoreceptor-specific nuclear receptor-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000016174.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | COUP transcription factor 1 [Desmophyllum pertusum] | Jbrowse |
| BRAKERLUSP00000016175.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | COUP transcription factor 2-like isoform X1 [Pocillopora damicornis] | Jbrowse |
| BRAKERLUSP00000016290.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000017625.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000017815.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000020020.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000020793.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | positive regulation of rhodopsin protein expression [Desmophyllum pertusum] | Jbrowse |
| BRAKERLUSP00000022759.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | photoreceptor-specific nuclear receptor-like isoform X2 [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000029399.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group C member 1-like [Orbicella faveolata] | Jbrowse |
| BRAKERLUSP00000032285.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | Nuclear receptor sub 2 group F member 6 [Desmophyllum pertusum] | Jbrowse |
| g13241.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
| g13558.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-like [Orbicella faveolata] | Jbrowse |
| g14820.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Jbrowse |
| g14836.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | COUP transcription factor 2-like isoform X1 [Pocillopora damicornis] | Jbrowse |
| g14836.t2.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | COUP transcription factor 1 [Desmophyllum pertusum] | Jbrowse |
| g15592.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | Nuclear receptor sub 2 group F member 6 [Desmophyllum pertusum] | Jbrowse |
| g18634.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | photoreceptor-specific nuclear receptor-like [Orbicella faveolata] | Jbrowse |
| g23132.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | hepatocyte nuclear factor 4-gamma-like isoform X4 [Orbicella faveolata] | Jbrowse |
| g24325.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Jbrowse |
| g24591.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Jbrowse |
| g30863.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | positive regulation of rhodopsin protein expression [Desmophyllum pertusum] | Jbrowse |
| g30864.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Jbrowse |
| g7234.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | nuclear receptor subfamily 2 group C member 1-like [Orbicella faveolata] | Jbrowse |
| g9001.t1.1 | self-build | zf-C4|RXR-like | Retinoid_X_Receptor-like | photoreceptor-specific nuclear receptor-like isoform X2 [Orbicella faveolata] | Jbrowse |
