Transcription Factors Family in Chrysaora quinquecirrha

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>bHLH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
evm.model.HiC_scaffold_10.270PF00010HLH domainHelix-loop-helix DNA-binding domainJbrowse
evm.model.HiC_scaffold_10.276PF00010HLH domainHelix-loop-helix DNA-binding domainJbrowse
evm.model.HiC_scaffold_10.427PF00010HLH domainHelix-loop-helix DNA-binding domainpredicted protein, partial [Nematostella vectensis]Jbrowse
evm.model.HiC_scaffold_13.406PF00010HLH domainHelix-loop-helix DNA-binding domainMITF [Clytia hemisphaerica]Jbrowse
evm.model.HiC_scaffold_13.496PF00010HLH domainHelix-loop-helix DNA-binding domainNeuronal PAS domain-containing protein 2 [Exaiptasia diaphana]Jbrowse
evm.model.HiC_scaffold_14.285PF00010HLH domainHelix-loop-helix DNA-binding domainprotein max-like isoform X2 [Stylophora pistillata]Jbrowse
evm.model.HiC_scaffold_14.404PF00010HLH domainHelix-loop-helix DNA-binding domainpredicted protein, partial [Nematostella vectensis]Jbrowse
evm.model.HiC_scaffold_16.263PF00010HLH domainHelix-loop-helix DNA-binding domainhypothetical protein GDO81_011326 [Engystomops pustulosus]Jbrowse
evm.model.HiC_scaffold_16.356PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC5513658 [Nematostella vectensis]Jbrowse
evm.model.HiC_scaffold_17.277PF00010HLH domainHelix-loop-helix DNA-binding domainaryl hydrocarbon receptor nuclear translocator homolog [Stylophora pistillata]Jbrowse
evm.model.HiC_scaffold_18.189PF00010HLH domainHelix-loop-helix DNA-binding domainupstream stimulatory factor 2 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_18.295PF00010HLH domainHelix-loop-helix DNA-binding domainJbrowse
evm.model.HiC_scaffold_181.15PF00010HLH domainHelix-loop-helix DNA-binding domainsterol regulatory element-binding protein 1 [Exaiptasia diaphana]Jbrowse
evm.model.HiC_scaffold_181.28PF00010HLH domainHelix-loop-helix DNA-binding domainsterol regulatory element-binding protein 1 [Exaiptasia diaphana]Jbrowse
evm.model.HiC_scaffold_184.22PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-2-like [Acropora millepora]Jbrowse
evm.model.HiC_scaffold_20.12PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC101240914 isoform X2 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_23.326PF00010HLH domainHelix-loop-helix DNA-binding domainPREDICTED: transcription factor 24-like [Branchiostoma belcheri]Jbrowse
evm.model.HiC_scaffold_27.376PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-1-B-like [Pecten maximus]Jbrowse
evm.model.HiC_scaffold_28.28PF00010HLH domainHelix-loop-helix DNA-binding domaindimethylaniline monooxygenase [N-oxide-forming] 2 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_301.16PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-1 [Exaiptasia diaphana]Jbrowse
evm.model.HiC_scaffold_308.22PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-2-like [Acropora millepora]Jbrowse
evm.model.HiC_scaffold_32.131PF00010HLH domainHelix-loop-helix DNA-binding domaincarbohydrate-responsive element-binding protein-like isoform X2 [Stylophora pistillata]Jbrowse
evm.model.HiC_scaffold_32.217PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor Atl1 [Podocoryna carnea]Jbrowse
evm.model.HiC_scaffold_32.338PF00010HLH domainHelix-loop-helix DNA-binding domainHypothetical predicted protein, partial [Paramuricea clavata]Jbrowse
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