Transcription Factors Family in Hemicorallium imperiale

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>bHLH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
evm.model.Chr01.1130PF00010HLH domainHelix-loop-helix DNA-binding domaindhand, partial, partial [Paramuricea clavata]Jbrowse
evm.model.Chr01.114PF00010HLH domainHelix-loop-helix DNA-binding domainsterol regulatory element-binding protein 1-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr01.1293PF00010HLH domainHelix-loop-helix DNA-binding domainneurogenic differentiation factor 1 [Paramuricea clavata]Jbrowse
evm.model.Chr01.1311PF00010HLH domainHelix-loop-helix DNA-binding domainmicrophthalmia-associated transcription factor-like isoform X2 [Paramuricea clavata]Jbrowse
evm.model.Chr01.328PF00010HLH domainHelix-loop-helix DNA-binding domainneuronal PAS domain-containing protein 2-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr01.5288PF00010HLH domainHelix-loop-helix DNA-binding domainheart- and neural crest derivatives-expressed protein 1-like [Clupea harengus]Jbrowse
evm.model.Chr01.5292PF00010HLH domainHelix-loop-helix DNA-binding domainheart- and neural crest derivatives-expressed protein 1-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr01.5293PF00010HLH domainHelix-loop-helix DNA-binding domainheart- and neural crest derivatives-expressed protein 1 [Paramuricea clavata]Jbrowse
evm.model.Chr01.5325PF00010HLH domainHelix-loop-helix DNA-binding domainUpstream stimulatory factor 1 [Paramuricea clavata]Jbrowse
evm.model.Chr02.108PF00010HLH domainHelix-loop-helix DNA-binding domainT-cell acute lymphocytic leukemia protein 1 homolog [Dendronephthya gigantea]Jbrowse
evm.model.Chr02.109PF00010HLH domainHelix-loop-helix DNA-binding domainhelix-loop-helix 1 [Paramuricea clavata]Jbrowse
evm.model.Chr02.1764PF00010HLH domainHelix-loop-helix DNA-binding domainhypothetical protein LOTGIDRAFT_97309, partial [Lottia gigantea]Jbrowse
evm.model.Chr02.509PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor 15-like [Paramuricea clavata]Jbrowse
evm.model.Chr02.511PF00010HLH domainHelix-loop-helix DNA-binding domaintwist-related 2-like [Paramuricea clavata]Jbrowse
evm.model.Chr02.623PF00010HLH domainHelix-loop-helix DNA-binding domainprotein Fer3-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr02.740PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC114526482 [Dendronephthya gigantea]Jbrowse
evm.model.Chr02.741PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor 15-like isoform X2 [Paramuricea clavata]Jbrowse
evm.model.Chr02.807PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor 15-like [Paramuricea clavata]Jbrowse
evm.model.Chr04.1227PF00010HLH domainHelix-loop-helix DNA-binding domainmax dimerization protein 3-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr04.863PF00010HLH domainHelix-loop-helix DNA-binding domaincarbohydrate-responsive element-binding -like [Paramuricea clavata]Jbrowse
evm.model.Chr04.933PF00010HLH domainHelix-loop-helix DNA-binding domain---NA--- [Paramuricea clavata]Jbrowse
evm.model.Chr05.692PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor-like 5 isoform X1 [Paramuricea clavata]Jbrowse
evm.model.Chr05.850PF00010HLH domainHelix-loop-helix DNA-binding domainmax dimerization protein 1-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr06.1091PF00010HLH domainHelix-loop-helix DNA-binding domainmax isoform X1 [Paramuricea clavata]Jbrowse
evm.model.Chr06.1203PF00010HLH domainHelix-loop-helix DNA-binding domainHelix-loop-helix DNA-binding domain protein [Trichinella nativa]Jbrowse
evm.model.Chr06.1204PF00010HLH domainHelix-loop-helix DNA-binding domainclass A basic helix-loop-helix 15 [Paramuricea clavata]Jbrowse
evm.model.Chr06.1290PF00010HLH domainHelix-loop-helix DNA-binding domainJbrowse
evm.model.Chr06.1550PF00010HLH domainHelix-loop-helix DNA-binding domainneurogenic differentiation factor 4 [Paramuricea clavata]Jbrowse
evm.model.Chr07.585PF00010HLH domainHelix-loop-helix DNA-binding domainmyc proto-oncogene -like [Paramuricea clavata]Jbrowse
evm.model.Chr07.590PF00010HLH domainHelix-loop-helix DNA-binding domainprotein cycle-like isoform X2 [Dendronephthya gigantea]Jbrowse
evm.model.Chr07.647PF00010HLH domainHelix-loop-helix DNA-binding domaintranscriptional regulator Myc-A-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr07.648PF00010HLH domainHelix-loop-helix DNA-binding domainmyc proto-oncogene -like isoform X2 [Paramuricea clavata]Jbrowse
evm.model.Chr08.247PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC114518197 [Dendronephthya gigantea]Jbrowse
evm.model.Chr08.253PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC114518197 [Dendronephthya gigantea]Jbrowse
evm.model.Chr08.553PF00010HLH domainHelix-loop-helix DNA-binding domaintwist-related -like [Paramuricea clavata]Jbrowse
evm.model.Chr10.523PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-4-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr16.103PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC124439552 isoform X1 [Xenia sp. Carnegie-2017]Jbrowse
evm.model.Chr16.163PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC114530879 [Dendronephthya gigantea]Jbrowse
evm.model.Chr16.253PF00010HLH domainHelix-loop-helix DNA-binding domainachaete-scute homolog 2 [Paramuricea clavata]Jbrowse
evm.model.Chr16.31PF00010HLH domainHelix-loop-helix DNA-binding domainachaete-scute homolog 4-like [Paramuricea clavata]Jbrowse
evm.model.Chr16.683PF00010HLH domainHelix-loop-helix DNA-binding domainG2 M phase-specific E3 ubiquitin- ligase [Paramuricea clavata]Jbrowse
evm.model.Chr16.704PF00010HLH domainHelix-loop-helix DNA-binding domainachaete-scute homolog 1-like [Paramuricea clavata]Jbrowse
evm.model.Chr16.726PF00010HLH domainHelix-loop-helix DNA-binding domainachaete-scute complex protein T3-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr17.530PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-4-A-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr17.531PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-2-like [Paramuricea clavata]Jbrowse
evm.model.Chr18.164PF00010HLH domainHelix-loop-helix DNA-binding domainneurogenic differentiation factor 1-like [Paramuricea clavata]Jbrowse
evm.model.Chr19.223PF00010HLH domainHelix-loop-helix DNA-binding domainatonal homolog 8-like [Paramuricea clavata]Jbrowse
evm.model.Chr19.226PF00010HLH domainHelix-loop-helix DNA-binding domainclass A basic helix-loop-helix protein 15-like [Dendronephthya gigantea]Jbrowse
evm.model.Chr20.407PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor 12-like isoform X1 [Dendronephthya gigantea]Jbrowse
evm.model.Chr21.512PF00010HLH domainHelix-loop-helix DNA-binding domaintranscription factor HES-4-B-like isoform X2 [Dendronephthya gigantea]Jbrowse
evm.model.Chr21.567PF00010HLH domainHelix-loop-helix DNA-binding domainuncharacterized protein LOC114517911 [Dendronephthya gigantea]Jbrowse
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