Transcription Factors Family in Acropora echinata

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>zf-CCCH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
aech_s0001.g119.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)mRNA decay activator protein ZFP36L1-like [Acropora millepora]Jbrowse
aech_s0002.g13.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like [Acropora digitifera]Jbrowse
aech_s0002.g140.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like [Acropora millepora]Jbrowse
aech_s0004.g126.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 3-like [Acropora millepora]Jbrowse
aech_s0007.g26.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)putative E3 ubiquitin-protein ligase UNKL isoform X1 [Acropora millepora]Jbrowse
aech_s0007.g26.t2PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)putative E3 ubiquitin-protein ligase UNKL isoform X2 [Acropora millepora]Jbrowse
aech_s0014.g100.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora]Jbrowse
aech_s0015.g171.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)tRNA (guanine(26)-N(2))-dimethyltransferase-like isoform X1 [Acropora millepora]Jbrowse
aech_s0016.g116.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)splicing factor U2AF 26 kDa subunit-like [Acropora millepora]Jbrowse
aech_s0016.g158.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)muscleblind-like protein 1 isoform X4 [Acropora millepora]Jbrowse
aech_s0027.g146.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Acropora millepora]Jbrowse
aech_s0035.g79.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)LOW QUALITY PROTEIN: uncharacterized protein LOC114962418 [Acropora millepora]Jbrowse
aech_s0036.g63.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 10-like [Acropora millepora]Jbrowse
aech_s0038.g101.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC114975854 isoform X2 [Acropora millepora]Jbrowse
aech_s0045.g146.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)probable E3 ubiquitin-protein ligase makorin-1 [Acropora millepora]Jbrowse
aech_s0045.g146.t3PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)probable E3 ubiquitin-protein ligase makorin-1 [Acropora millepora]Jbrowse
aech_s0046.g67.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger matrin-type protein 5-like [Acropora millepora]Jbrowse
aech_s0048.g39.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC114964247 [Acropora millepora]Jbrowse
aech_s0052.g102.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)cleavage and polyadenylation specificity factor subunit 4-like isoform X2 [Acropora millepora]Jbrowse
aech_s0053.g61.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)protein mono-ADP-ribosyltransferase PARP12-like [Acropora millepora]Jbrowse
aech_s0116.g23.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 13-like [Acropora millepora]Jbrowse
aech_s1197.g1.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)protein mono-ADP-ribosyltransferase PARP12-like [Acropora millepora]Jbrowse
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