Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.
| Gene | Pfam/Self-build | DNA Binding Domain | Full name | Description | Jbrowse |
|---|---|---|---|---|---|
| evm.model.Ap1.2287 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | uncharacterized protein LOC111341794 [Stylophora pistillata] | Jbrowse |
| evm.model.Ap1.2291 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | uncharacterized protein LOC110050618 isoform X1 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap1.3428 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | probable E3 ubiquitin-protein ligase makorin-1 isoform X2 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap10.84 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | hypothetical protein OS493_034896 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap11.1066 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | roquin-1-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap11.836 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger CCCH domain-containing protein 15-like [Pocillopora damicornis] | Jbrowse |
| evm.model.Ap11.836.1.5f15dc6e | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger CCCH domain-containing protein 15-like [Pocillopora damicornis] | Jbrowse |
| evm.model.Ap12.1113 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | cleavage and polyadenylation specificity factor subunit 4-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap12.1414 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | RING finger protein unkempt homolog [Orbicella faveolata] | Jbrowse |
| evm.model.Ap12.1977 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | hypothetical protein OS493_037234, partial [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap13.1519 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | mRNA decay activator protein ZFP36L1-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap14.1020 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | hypothetical protein OS493_029908 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap14.992 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | unnamed protein product [Porites evermanni] | Jbrowse |
| evm.model.Ap2.3094 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger CCCH domain-containing protein 10-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap3.1728 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger matrin-type protein 5-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap3.1729 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger matrin-type protein 5-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap3.230 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | uncharacterized protein LOC110060054 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap4.5724 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Zinc finger CCCH domain-containing protein 3 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap4.5724.1.5f15e2e3 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Zinc finger CCCH domain-containing protein 3 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap5.1944 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like [Orbicella faveolata] | Jbrowse |
| evm.model.Ap6.1265 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | unnamed protein product [Pocillopora meandrina] | Jbrowse |
| evm.model.Ap6.1959 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | testis- and ovary-specific PAZ domain-containing protein 1 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap6.1961 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | testis- and ovary-specific PAZ domain-containing protein 1 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap6.1962 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | testis- and ovary-specific PAZ domain-containing protein 1 [Desmophyllum pertusum] | Jbrowse |
| evm.model.Ap8.1258 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | muscleblind-like protein 2 isoform X8 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap8.1258.1.5f15e770 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | muscleblind-like protein 3 isoform X2 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap8.1258.2.5f15e770 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | muscleblind-like protein 2 isoform X7 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap8.1258.3.5f15e770 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | muscleblind-like protein 2 isoform X8 [Orbicella faveolata] | Jbrowse |
| evm.model.Ap8.1960 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | splicing factor U2AF 35 kDa subunit-like isoform X2 [Stylophora pistillata] | Jbrowse |
| evm.model.Ap8.695 | PF00642 | zf-CCCH domain | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | zinc finger CCCH domain-containing protein 13-like, partial [Orbicella faveolata] | Jbrowse |
