Transcription Factors Family in Cassiopea xamachana

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>zf-CCCH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
Cxam_g15059.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)hypothetical protein DAI22_06g134700 [Oryza sativa Japonica Group]Jbrowse
Cxam_g19837.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)muscleblind-like protein 3 isoform X2 [Exaiptasia diaphana]Jbrowse
Cxam_g21305.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)Jbrowse
Cxam_g21805.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)putative E3 ubiquitin-protein ligase UNKL isoform X2 [Hydra vulgaris]Jbrowse
Cxam_g22331.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)splicing factor U2AF 26 kDa subunit [Hydra vulgaris]Jbrowse
Cxam_g23222.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)Jbrowse
Cxam_g23413.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)ZC3H3 protein, putative, partial [Ixodes scapularis]Jbrowse
Cxam_g27694.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 10 [Hydra vulgaris]Jbrowse
Cxam_g29939.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC101235770 isoform X2 [Hydra vulgaris]Jbrowse
Cxam_g3852.t1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)predicted protein, partial [Nematostella vectensis]Jbrowse
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