Transcription Factors Family in Chrysaora quinquecirrha

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>zf-CCCH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
evm.model.HiC_scaffold_10.331PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC128221661 [Mya arenaria]Jbrowse
evm.model.HiC_scaffold_149.19PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)PREDICTED: cleavage and polyadenylation specificity factor subunit 4-like [Saccoglossus kowalevskii]Jbrowse
evm.model.HiC_scaffold_17.58PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)hypothetical protein OS493_034321 [Desmophyllum pertusum]Jbrowse
evm.model.HiC_scaffold_18.127PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)Jbrowse
evm.model.HiC_scaffold_25.152PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)hypothetical protein GWK47_028757 [Chionoecetes opilio]Jbrowse
evm.model.HiC_scaffold_282.113PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC100206476 [Hydra vulgaris]Jbrowse
evm.model.HiC_scaffold_29.1261PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)unnamed protein product [Pocillopora meandrina]Jbrowse
evm.model.HiC_scaffold_29.1264PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)unnamed protein product [Porites evermanni]Jbrowse
evm.model.HiC_scaffold_368.41PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)mRNA decay activator protein ZFP36L2-B [Hydra vulgaris]Jbrowse
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