Transcription Factors Family in Echinopora horrida

Transcription factors (TFs) of are usually classified into different families according to their conserved DBDs, which was based on the rule of AnimalTFDB 4.0 and self-build HMM profiles.

>>Gene Family>>TF family>>zf-CCCH

GenePfam/Self-buildDNA Binding DomainFull nameDescriptionJbrowse
ENSJVNP00000000598.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like [Orbicella faveolata]Jbrowse
ENSJVNP00000001098.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)pre-mRNA-splicing factor RBM22-like [Orbicella faveolata]Jbrowse
ENSJVNP00000007520.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 3-like isoform X1 [Orbicella faveolata]Jbrowse
ENSJVNP00000007532.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 3-like isoform X1 [Orbicella faveolata]Jbrowse
ENSJVNP00000008046.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 13-like, partial [Orbicella faveolata]Jbrowse
ENSJVNP00000010075.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like [Orbicella faveolata]Jbrowse
ENSJVNP00000010833.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)splicing factor U2AF 35 kDa subunit-like isoform X4 [Orbicella faveolata]Jbrowse
ENSJVNP00000010849.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)unnamed protein product [Porites evermanni]Jbrowse
ENSJVNP00000010866.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)unnamed protein product [Porites evermanni]Jbrowse
ENSJVNP00000011176.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)muscleblind-like protein 2 isoform X7 [Orbicella faveolata]Jbrowse
ENSJVNP00000016836.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 15-like [Orbicella faveolata]Jbrowse
ENSJVNP00000016856.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 15-like [Pocillopora damicornis]Jbrowse
ENSJVNP00000021153.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 10-like [Orbicella faveolata]Jbrowse
ENSJVNP00000021161.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 10-like [Orbicella faveolata]Jbrowse
ENSJVNP00000021173.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)zinc finger CCCH domain-containing protein 10-like [Orbicella faveolata]Jbrowse
ENSJVNP00000022685.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)tRNA (guanine(26)-N(2))-dimethyltransferase-like [Orbicella faveolata]Jbrowse
ENSJVNP00000030873.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC110050618 isoform X1 [Orbicella faveolata]Jbrowse
ENSJVNP00000034185.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)probable E3 ubiquitin-protein ligase makorin-1 isoform X1 [Orbicella faveolata]Jbrowse
ENSJVNP00000034197.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)probable E3 ubiquitin-protein ligase makorin-1 isoform X3 [Orbicella faveolata]Jbrowse
ENSJVNP00000034761.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)uncharacterized protein LOC110043506 [Orbicella faveolata]Jbrowse
ENSJVNP00000036325.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)RING finger protein unkempt homolog [Orbicella faveolata]Jbrowse
ENSJVNP00000037802.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)cleavage and polyadenylation specificity factor subunit 4-like [Orbicella faveolata]Jbrowse
ENSJVNP00000038290.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)mRNA decay activator protein ZFP36L1-like [Orbicella faveolata]Jbrowse
ENSJVNP00000040919.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)unnamed protein product [Pocillopora meandrina]Jbrowse
ENSJVNP00000046769.1PF00642zf-CCCH domainZinc finger C-x8-C-x5-C-x3-H type (and similar)nucleoporin-like protein 2 [Orbicella faveolata]Jbrowse
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