Detailed information of 12220_t.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: KAJ7370916.1, Vacuolar protein sorting-associated protein 52 [Desmophyllum pertusum]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C754Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1
O55166Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2
Q5TJF0Vacuolar protein sorting-associated protein 52 homolog OS=Canis lupus familiaris OX=9615 GN=VPS52 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003151 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20655
all species →
Vps52_CVps52, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007258
all species →
FamilyVps52Interproscan
IPR048361
all species →
DomainVps52, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190
all species →
SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000938
all species →
Cellular ComponentGARP complexInterproscan
GO:0006896
all species →
Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041
all species →
Biological Processlysosomal transportInterproscan
GO:0019905
all species →
Molecular Functionsyntaxin bindingInterproscan
GO:0032456
all species →
Biological Processendocytic recyclingInterproscan
GO:0042147
all species →
Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for 12220_t.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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