Detailed information of 248_t.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3138116.1, unnamed protein product, partial [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q503E1Integrator complex subunit 11 OS=Danio rerio OX=7955 GN=cpsf3l PE=2 SV=1
Q5ZIH0Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1
Q9CWS4Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10996
all species →
Beta-CaspBeta-Casp domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022712
all species →
DomainBeta-Casp domainInterproscan
IPR050698
all species →
FamilyRNA Processing Metallo-Beta-Lactamase Domain-Containing ProteinInterproscan
IPR036866
all species →
Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11203
all species →
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004521
all species →
Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0016180
all species →
Biological ProcesssnRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for 248_t.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP