Gene detail

Detailed information of 42822_t.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029190990.2, uncharacterized protein LOC114957663 isoform X1 [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

42822_t

ATGGAGGAGTGCTTTTCCGAAGATCGAAAAATGGAGGTCGAAGCCCTGCAATCGATCTATGGAGAATTGTTTACAACATTCGAAGGAGGAGATCATGATGAAATATTCCACTATGAAGTGAATCTTATGCAAAGCGatatcaaaataattttcacaATTCCAGAAAAATACCCAGAAATTCCTCCTGCTATCAATGTTATGGCACAGAATAACCAACCTGCCTATACAGAACTGGAATCGCTACTGTACAGCAAGGCACATGAAAGCTGTGGACAAGTGATGATATATGATCTGGTGGAAGAAGCTAAGTGTTGGTTTATAGATAAACTTAACTTTGTCAATCCAGTCTCTTTACCAGGAGAAAAAGAAGCAGTGGAAGTTGCATCCACTGTTTGTAAATTCTTCCTGGATGGAAATtgtaaatttggaaaaaagtaCCGCAATCAGCACATAGAGTTGGGAAGTGCTAGAAGCGGCAATGACGCAGAGTCATTGCACACTAATAAAAATGTTAAGGAACACATCACCCCAAAAGGAAAGCAAAAGTTTGTGAAACAAGATAACAATGTCTCTACGAAGAAACCATCCATGAAAACAGCGAGTGATGTCATATCAAGAATCAAATGGGATGCAGAGTTGTCACCAAAGGATTTCACTGTTGGTTACCTAGATCGCTTTGTTGGAATTATAGAGAAGCATTTTGAAGATTTTTCGTGGGATGACCTtgcttcagttgatcattttgtTGACCTGGCTATTCCTCGGCACAGAATACAGTATTTCAAGTACCTTGAGGAAATAGTTTGGGACAAAAGGGAAAGGATTGACAAGGTCTTTGGCTCAACTGGAAGCCAAGAAACTATATTGGATGTAAAACAGAGAATTAATTGTGCATCAAATGAAGAGAATGATGCAGATTGCAGTGATTCAAAGCAAGTGTCAGTTGTAGATGAAATGAACTGCGCAACAAATTATATCCCTGAAGAACTCCAAGAGAGGAGAGTCCCGAATTACTTCATTGCTGTGCAGATTTCCGATGAGGAAGTAATTGACAACATTCGTAAGATTCAAAATGATATTTATGCAGAGCTGAGTCCAGAAGCAGAGCTTGAACTGATTGCAAGCCAAAGACTTCACATCACCCTTCTTATGTTAAGTCTATGTGATGAAGATCAAGTGACCATGGCTAAGAGCATCCTTAGGTCTGTTcaaccaatgttgatttccattCTTCCAATCAGCCACAAACTTTGCTTTAGTGGTATTGGCCAGTTTCACAACAAGATCTTATATGCCCGTATCAAAGATGACACAGGACTTTCCAAACTTCTTgagattttaaaatttaagttTGGTAAAGCTGGAATCAATTTGGAAGCAAACCCGGATAAATTTGTACCCCATGTGACCATCAGCAAAGGAACTTCAAAGGATTTTGCCACCAACCAAAGTGTTACAAGAAATGTGTCAAATGTGGTTAACCGGGCCTGCTATGAAATTGGTGAACAAAGTGTTTATTCCCTAGCTCTGTTCTCAAGATTCCATCCAAAAGATATTGATGGCACTTACCACAAGATTTCAACAGTAGAAAATTCCGTGAAAGCTTTGTCGTCATCCTTGCCCAGAAAACTCCTTCAGCGAGTGGATCATTTGTATGACCAAGGAGAACTTGAGGAAGATAACAGAGATGAACTTGAAGGTTTCTTTCAATCTGGTGATGCTGTTAAACTTGACAAAGGAGTGACAATTTTGAGCGATCTTAGAACGATCTCTGATGATAAAATTTTGCTCATATTGAGAGGTGTATCTGGCAGCGGCAAAACTTATCTGGTTGAGAATTCGATGGAGGCCATCGAACAAAAAGGTTATGTTTATTGTAGTGCCAAGCAATTATTTCATAAGCCAGGGTGTTCTGTGACACCAGACATCACTGAGCAGAATATTGCCGAAGCTTACTGTTTCTCCCTCGTGTTAGATGCCTTAGCAAGTGAGCAATGCTTTGTGGTCGTGGATGGAGTGCATAACAACTGCTGGGAatatgctatttacaagtttCTTGGTCCCGCATTCGGTTACAAGTGTCATGTTcttgaaataaaagttgaaaagcGGGAGGACATTCAGTCATGCCTGCAGAATAACAAAACCGGAACACAGCTTGAAGAAATTCTTGAAGCTGTGCAGAACTGGGAAGATGATCCAGAGGCCATTGTAATTGAACCGTGGTTTAATAAACCAGCTTCCACAGCCTCGAATCAGAGGAGAATTGCACTCAAGGAGTTGCTATTGAGACACGCATCTCAATAA

Transcript

42822_t

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96B70	Leukocyte receptor cluster member 9 OS=Homo sapiens OX=9606 GN=LENG9 PE=1 SV=2
Q8BTN6	Leukocyte receptor cluster member 9 OS=Mus musculus OX=10090 GN=Leng9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006798 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04457 all species →	MJ1316	MJ1316 RNA cyclic group end recognition domain	Domain	Interproscan
PF05773 all species →	RWD	RWD domain	Domain	Interproscan
PF10469 all species →	AKAP7_NLS	AKAP7 2'5' RNA ligase-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR006575 all species →	Domain	RWD domain	Interproscan
IPR009097 all species →	Homologous_superfamily	Cyclic phosphodiesterase	Interproscan
IPR040459 all species →	Domain	MJ1316 RNA cyclic group end recognition domain	Interproscan
IPR042653 all species →	Family	Leukocyte receptor cluster member 9	Interproscan
IPR019510 all species →	Domain	A-kinase anchor protein 7-like, phosphoesterase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46729 all species →	LEUKOCYTE RECEPTOR CLUSTER MEMBER 9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for 42822_t.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.