Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ASP3 · all data for this species · gene families
4_ENSDKXP00000006366.1 in ASP3 (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17125 all species → | Methyltr_RsmF_N | N-terminal domain of 16S rRNA methyltransferase RsmF | Domain | Interproscan |
| PF01189 all species → | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023267 all species → | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR031341 all species → | Domain | Ribosomal RNA small subunit methyltransferase F, N-terminal | Interproscan |
| IPR011023 all species → | Domain | Nop2p | Interproscan |
| IPR001678 all species → | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| IPR029063 all species → | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR023273 all species → | Family | RNA (C5-cytosine) methyltransferase, NOP2 | Interproscan |
| IPR049560 all species → | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| IPR018314 all species → | Conserved_site | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22807 all species → | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000470 all species → | Biological Process | maturation of LSU-rRNA | Interproscan |
| GO:0001510 all species → | Biological Process | RNA methylation | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0008173 all species → | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0009383 all species → | Molecular Function | rRNA (cytosine-C5-)-methyltransferase activity | Interproscan |
| GO:0070475 all species → | Biological Process | rRNA base methylation | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0008757 all species → | Molecular Function | S-adenosylmethionine-dependent methyltransferase activity | Interproscan |
| GO:0008168 all species → | Molecular Function | methyltransferase activity | Interproscan |
4_ENSDKXP00000006366.1.
