Detailed information of ANN00135-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:2250229...2251122
NR annotation: XP_029196520.2, peptidyl-prolyl cis-trans isomerase E-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4FV72Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus OX=9913 GN=PPIE PE=2 SV=1
Q5R723Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii OX=9601 GN=PPIE PE=2 SV=1
Q9QZH3Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus OX=10090 GN=Ppie PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000361 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan
PF00160
all species →		Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029000
all species →		Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR002130
all species →		DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR020892
all species →		Conserved_siteCyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteInterproscan
IPR016304
all species →		FamilyPeptidyl-prolyl cis-trans isomerase EInterproscan
IPR034168
all species →		DomainPeptidyl-prolyl cis-trans isomerase E, RNA recognition motifInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11071
all species →		PEPTIDYL-PROLYL CIS-TRANS ISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000413
all species →		Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755
all species →		Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0006457
all species →		Biological Processprotein foldingInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09564PPIE; peptidyl-prolyl isomerase E (cyclophilin E)EC:5.2.1.8
Chaperones and folding catalystsko03110deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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