Detailed information of ANN00135-RA in Nanomia septata

Genomic Location: chr1:10508676...10509016
NR annotation: XP_038636853.1, E3 ubiquitin-protein ligase BRE1B-like [Scyliorhinus canicula]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5DTM8E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2
A2VDP1E3 ubiquitin-protein ligase BRE1A OS=Bos taurus OX=9913 GN=RNF20 PE=2 SV=1
Q5VTR2E3 ubiquitin-protein ligase BRE1A OS=Homo sapiens OX=9606 GN=RNF20 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013956FamilyE3 ubiquitin ligase Bre1Interproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23163RING FINGER PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033503Cellular ComponentHULC complexInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071894Biological Processobsolete histone H2B conserved C-terminal lysine ubiquitinationInterproscan

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