Detailed information of ANN00178-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:2872232...2878360
NR annotation: XP_020615164.1, dyslexia susceptibility 1 candidate gene 1 protein-like [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R368Dynein axonemal assembly factor 4 OS=Mus musculus OX=10090 GN=Dnaaf4 PE=1 SV=2
Q5VJS5Dynein axonemal assembly factor 4 OS=Rattus norvegicus OX=10116 GN=Dnaaf4 PE=1 SV=1
Q863A7Dynein axonemal assembly factor 4 OS=Pan troglodytes OX=9598 GN=DNAAF4 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006981 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04969
all species →		CSCS domainDomainInterproscan
PF00515
all species →		TPR_1Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR007052
all species →		DomainCS domainInterproscan
IPR037894
all species →		DomainDynein axonemal assembly factor 4, CS domainInterproscan
IPR052004
all species →		FamilyAxonemal Dynein Assembly Factor 4Interproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR008978
all species →		Homologous_superfamilyHSP20-like chaperoneInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46492
all species →		DYNEIN ASSEMBLY FACTOR 4, AXONEMALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003341
all species →		Biological Processcilium movementInterproscan
GO:0036158
all species →		Biological Processouter dynein arm assemblyInterproscan
GO:0036159
all species →		Biological Processinner dynein arm assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19758DNAAF4, DYX1C1; dynein axonemal assembly factor 4-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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