Gene detail

Detailed information of ANN00212-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:3343448...3349070
NR annotation: XP_044166985.1, uncharacterized protein LOC122947289 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN00212-RA

ATGTCTACACTAAAAACTGTTCAACGGGAGTTCATTTATAAATTGGACAAAATAGCCATAGAACTGATAACACCTGAAGTATTGGAGGACATGAAACTTCTGTGCGATTTGCCGTGGGGTAAACTTGAGTCGATCAACACACCACGAAAATTTGTTCAAATCCTGCTTGGACGACGTAAAATTGTTCCAGGAGACGTAACGTACTTGGTTTCCCTTCTGGAAAAGACAGGGAATATCCGGCTTGCCAGTGTTGTCATGGAGGAACTGGGACCGTTATCTTCACCAAACACCAGCCAGGTGAACAATCTCCCCTGCCTAACAGCGCACTTCAAAGGAAGGGAAGCAACTGTGGATGGAATTATAAAAAAACTCACGCAGGTTGCAAATCCTTCCCGCATGGTTGTGATTGTTGCTCTCCCTGGGATGGGGAAGACACAAGTTGCACTTCGCGTCAGTCATGGTCTACTTGAATATGGAAAATCAGTTCTTTTCATTGAAAAGCAAAACAACCTCGCGGATGTCTGCGGCGAGATCCTTGGTCGGATAACCGGTCGGCACTTATCGGAAAAGCACGATCTTCTATCCATCGCTAAGCGCAGGCTAAAGGAGCTCCAAGAAGACACAGTTATCGTCCTTGACAGCACCGAAGACATACAGGGAAAGGAATTTGATGACCTTGCAGAATACCTAATGAAGTATGCACCTAAAGTTCAAATAATTATCACTACTCGAGAGGATGTAGGCCTCGCCTCATTGAACATACATAAAGAACGTCTCCAACCCTTGGACTCCGACTCGTCCCTCAGTTTACTTCAGGAATCAGCGGAAAACTTTGATGAGCATAGCAACGAACTCTGCGAGCTCTGTGGAGGAATACCACTGCTTCTTGTCCACTGTGCGCGCTTACTCGAAGATGCCGTCAGCCCAGCAGTTTTAACCCAAGGGCTTAGAGAAAACCCAATACGACTCCTGAAGGCTAGTGCAAAAGATGTTTACGATACATTGGGCCAATTCCTGAGAGGGTTTCCCCCGGAACTAGTATCAAATCTTGTCATACTATCGGTATTTCCATCAGCATTTTCTGGAGAAGACATAGAGTTTCTTTTTGATGATCACTTGAAACTGGAGGCAGTCAAAACAACGATGGTGAAGTGCTCTCTTTTGCAGAAGATGAACAGTGGAATGGTCGTCTTGCATCCATTGGTCCGTGAGTACTGCCGAGCTGAGAAGGAGACCCTGGAATTGGAGGATGTAGGCAAAGCTGCCCAGAAGAAGTTTAATCACCACTACCTTGGTTTGCTGAAAAGATTAAGGAAACAATTCATCAGCAAAGACTCAGCCATGGATGCCATCCCTTTGTTTAGGAAAGATAAAGCAAACATCATGGAAGCATTAACGAATTGTCTGCAGGACAAAAGCAGCACAGATGAGAGAACATTTGGCATAGACGTGGCCAACAGTACTGAGGTCCTGGATTTCTTGGCCAAAGTGTTATTGCCGCCATCAGAGTGTACTAAACTGTATAAATTGTGCTGCGACATTACCCAAGCTTCTGGTGACAAAAGGAGACTTGCAGACAGTCTAACCTCACTAGGGTGTTGTCGTCTTTGTGATGTGGCGCACCGAAAGGGCGACCAGCTTACTCGTGACATGTTCCAGAGGGCATATGACATCCGTATGGGACTTCCAGAGGAGCAGCAGAAAAGTGAGACGCATACGATCAATATCTGCAAGCTCGGATTGTGCTACTCACTTCAGGGTGAAAACGAAAAAGGGCGCGAGTTTATCCAACAAGGAATTGATATGAGAGAAAGCCTTGGTCTTCCTCTGTATGTAGCAGCTGGTTATTGTGATCTTGGAAATACTTATCGAGAGTGTGGTGAACATCAAAAAGCCATTGACATCTGGGAAGAGAAAACTTTGCAAGTGTACAAAGATGAGCTTGGGGGCCACCCCTGGACTGCTTCAATCCTACGATACATTGCTGGTTCGTACAAGGCCCTCGCCGATGAAACCCCAGAGCTTGAGAAGCAAGGAAGCCCTAAGCTGCTGGGGGTCCATCAGGATACTGCCCGCTCGCATTATGATCTCAGCGAAGTGTTGGAGATTAAAAAAGAATTTAAATTAGCTTTGGAAGAGCTTGAAAACGCGCTTGAAATCCAAAAGGATGTTTTAGGCAGTGACCATGAGAGCACGATGAACACGCGGGCAAAAATGGAGCGAATTTCAGGCATGATGGTCAGCCAAGCTCAACCAAAA

Transcript

ANN00212-RA

ATCGCATTGCGATGTCTACACTAAAAACTGTTCAACGGGAGTTCATTTATAAATTGGACAAAATAGCCATAGAACTGATAACACCTGAAGTATTGGAGGACATGAAACTTCTGTGCGATTTGCCGTGGGGTAAACTTGAGTCGATCAACACACCACGAAAATTTGTTCAAATCCTGCTTGGACGACGTAAAATTGTTCCAGGAGACGTAACGTACTTGGTTTCCCTTCTGGAAAAGACAGGGAATATCCGGCTTGCCAGTGTTGTCATGGAGGAACTGGGACCGTTATCTTCACCAAACACCAGCCAGGTGAACAATCTCCCCTGCCTAACAGCGCACTTCAAAGGAAGGGAAGCAACTGTGGATGGAATTATAAAAAAACTCACGCAGGTTGCAAATCCTTCCCGCATGGTTGTGATTGTTGCTCTCCCTGGGATGGGGAAGACACAAGTTGCACTTCGCGTCAGTCATGGTCTACTTGAATATGGAAAATCAGTTCTTTTCATTGAAAAGCAAAACAACCTCGCGGATGTCTGCGGCGAGATCCTTGGTCGGATAACCGGTCGGCACTTATCGGAAAAGCACGATCTTCTATCCATCGCTAAGCGCAGGCTAAAGGAGCTCCAAGAAGACACAGTTATCGTCCTTGACAGCACCGAAGACATACAGGGAAAGGAATTTGATGACCTTGCAGAATACCTAATGAAGTATGCACCTAAAGTTCAAATAATTATCACTACTCGAGAGGATGTAGGCCTCGCCTCATTGAACATACATAAAGAACGTCTCCAACCCTTGGACTCCGACTCGTCCCTCAGTTTACTTCAGGAATCAGCGGAAAACTTTGATGAGCATAGCAACGAACTCTGCGAGCTCTGTGGAGGAATACCACTGCTTCTTGTCCACTGTGCGCGCTTACTCGAAGATGCCGTCAGCCCAGCAGTTTTAACCCAAGGGCTTAGAGAAAACCCAATACGACTCCTGAAGGCTAGTGCAAAAGATGTTTACGATACATTGGGCCAATTCCTGAGAGGGTTTCCCCCGGAACTAGTATCAAATCTTGTCATACTATCGGTATTTCCATCAGCATTTTCTGGAGAAGACATAGAGTTTCTTTTTGATGATCACTTGAAACTGGAGGCAGTCAAAACAACGATGGTGAAGTGCTCTCTTTTGCAGAAGATGAACAGTGGAATGGTCGTCTTGCATCCATTGGTCCGTGAGTACTGCCGAGCTGAGAAGGAGACCCTGGAATTGGAGGATGTAGGCAAAGCTGCCCAGAAGAAGTTTAATCACCACTACCTTGGTTTGCTGAAAAGATTAAGGAAACAATTCATCAGCAAAGACTCAGCCATGGATGCCATCCCTTTGTTTAGGAAAGATAAAGCAAACATCATGGAAGCATTAACGAATTGTCTGCAGGACAAAAGCAGCACAGATGAGAGAACATTTGGCATAGACGTGGCCAACAGTACTGAGGTCCTGGATTTCTTGGCCAAAGTGTTATTGCCGCCATCAGAGTGTACTAAACTGTATAAATTGTGCTGCGACATTACCCAAGCTTCTGGTGACAAAAGGAGACTTGCAGACAGTCTAACCTCACTAGGGTGTTGTCGTCTTTGTGATGTGGCGCACCGAAAGGGCGACCAGCTTACTCGTGACATGTTCCAGAGGGCATATGACATCCGTATGGGACTTCCAGAGGAGCAGCAGAAAAGTGAGACGCATACGATCAATATCTGCAAGCTCGGATTGTGCTACTCACTTCAGGGTGAAAACGAAAAAGGGCGCGAGTTTATCCAACAAGGAATTGATATGAGAGAAAGCCTTGGTCTTCCTCTGTATGTAGCAGCTGGTTATTGTGATCTTGGAAATACTTATCGAGAGTGTGGTGAACATCAAAAAGCCATTGACATCTGGGAAGAGAAAACTTTGCAAGTGTACAAAGATGAGCTTGGGGGCCACCCCTGGACTGCTTCAATCCTACGATACATTGCTGGTTCGTACAAGGCCCTCGCCGATGAAACCCCAGAGCTTGAGAAGCAAGGAAGCCCTAAGCTGCTGGGGGTCCATCAGGATACTGCCCGCTCGCATTATGATCTCAGCGAAGTGTTGGAGATTAAAAAAGAATTTAAATTAGCTTTGGAAGAGCTTGAAAACGCGCTTGAAATCCAAAAGGATGTTTTAGGCAGTGACCATGAGAGCACGATGAACACGCGGGCAAAAATGGAGCGAATTTCAGGCATGATGGTCAGCCAAGCTCAACCAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan