Gene detail

Detailed information of ANN00301-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:4938088...4945523
NR annotation: XP_020629743.1, uncharacterized protein LOC110066836 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN00301-RA

ATGGAAAATGGACAGCTCTGGGCGAAGAAATTTGGTATTGACTGGCCAGATTGTGTTTCGCAATGCGGAGAGGATCTCGGTGTGGGAGCGACTGTTTCACCGCCAATAGAGGAAACTAACCAAGGTGCGGGAGCGACTGTTTCATCACCAATACAGGAAACTAATCAAGGTGCGGGAACGACTGTTTCATCACCAATACAGGAAACTAATCGAGGTGTCCGAAGGAATCTGTCTCTTCTCCCTCAAGCAGTACCACATTTTGTGAATCGTGAAAATGAACGTAAACAGATTATGAAGTGCCTTCTTCCAGAGGACGAATGCAGATGCGTCTTCTTACATGGCGCCCCTGGAATAGGGAAGACAGCCTTGGCTATTAAGGTGGCTAATGAAATACTGAAAACTGACGACCATACCGTGGTTGTATACGTGAACTGTAAATATGTTGACTCGTTCGACGATTTTGCAGGGAAGGTTGTACAGCAAATTTACCATGGCCATTACCCTCAAGATGACCCAATACCCGCAATGAAGAATTGCCTGAAAGGTAGCGATTTCCTCACAGTTTTGTTGTTGAATAACTTTGAATTTCTGAGCCATTTTAATGACCCAGACGAGGGAAAGAGGGTTGAAGAATTTGTTGCGGAAGTAGTCACGAGTTGTAGAAACGTGAAGTTACTGGTCACCTCCTCAGTAAATGTCGGAGTTTTTCCTGAAATAGGCAGACAAAGAATTCCGCTGGCGCCATTTAAATTAGAGGAATCAGTTCAGCTTTTGCAGAAAGTGTGTGGAGGGAATTTCGTTGAAGAAGCATTCGTAGAGCAGCTGACAGATATTTGCAGTGGTATTCCTCTCGTCCTTTACGCCTTGATGGCTTCGGACGATGACCTTGTTAGCCGTTTGCAACAGATGCGTGCTTCTCCACCAGAAAAGCAATTCGAATATTTGCGAAAGATCAAAGCAGTCCCAGAAGAAAAAAAAATCGATGTCTGCCTAGATGTTTGCTTTGATAGACTTACAGAACCCAAAAAGGAAACCCTCGTAAAACTGGCCCTTATGAGAGGATGGTTTACACCGGCTGGTGCGGCAAAAGTGTTCCATTCGGAGGTGTTAATCATTCGCGAATACTGTAAACGCAAGGCATCAGAAGTGCAGTTTAGAGACGTTTTCCGTGATGCACGAAATCAGTTTATCGACCACTTCTTAACCTTCCTCAAAGACACATTTAAGAAGTTTCTGAGTACAAACGCACCAACGGCCATTAAAGAATTTTTGAAGGAAGAAGAAAACGTCATGCAACTTCGTGACTGGATTGACAAAGGTGAAATGGATGACGAAAGAATGGAGAGATGCATTGACGTCTTTAACACAGTGGGGGAGCTACTTGCGAAGATGATGGGGAGGACGAAGTTTAAATCTCTTTACGAATCGTTAAGAAGTAAGTGTGAAGATATGGAAGACAAAAGGTTTCTGAGTGAATGTCTCACGTCCCTGGGGATCAAAGAAGTGTTCAACTGTTCCTGCTCACCTGGTCTGTGTGATGAAGCCAGTACACGAGCCAAAGAGTACTTGGTGCAGGCCGACAACATCCAAACTGCTCTTGACATCGTCAAGGGTAACAGCAGAGCCCAATGTCTCGCTAAACTTGGCCGATGTGTGGCAAAAGACGACAGAACCCTTGCACTAGGAAAATCCAAGATTGAAGAGGCAATTCGAATTCGCGTAAAAGCATCAGAGGCACCTGGTGACGCGGAAGGTGGCGAAGACGTATGCAAAGTCATGTTGGGTGCAACACATAATGATATGGCAGTGGCTCTCTCGCTTGAAGGAAATCACCGACAGGCCGTAGAAATTAGAAAAGAGCAAGTCCTACCAATCTACAAAGAAAGGCTGGGCGATCATCCCTTCACCGCTACGATCCTCAACAATCTGTCGAACAATTTCCATGCTCTGAAAGAGTTTGACAACGCCCAACAGTATGCAGGAGAAGCTCTAAAGATTCGTCTTGAGTTGCTGAACGACCACATGGACACAGCCAAGTCCCTCTTTGACCTCGGGATGGTGCACAAGGAAAAGAACGAATGGGGGAATGCGAAGGATTACCTTGAGCAGTGCAAGAAAATGCAAGAGACCGTGCTGGATGATAGAATCAAGGACCTCACACGGTATCTTGCCTCATTTTTTCACACAGGACAAAACAAGAACTTGAAGATGTTTGCAAGCGTCTTGGTGGCATGCAGCTTGAGTAATCTCTTTCCGGGAGTCAACGATTTACGGAGGGAACAAATTCCTTACTTCCTTCTCAGTTTTCAGATTGAAGATGTAGCGGTCAAAATTAAGTTTTCAGAATCTAATTCGCTCCCGTCAGACGTCAATGGATGA

Transcript

ANN00301-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043531	Molecular Function	ADP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02603	ORC1; origin recognition complex subunit 1	-	Chromosome and associated proteins	ko03036	deepkoala