Detailed information of ANN00448-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:7728319...7749216
NR annotation: CAH3024733.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q25490Apolipophorins OS=Manduca sexta OX=7130 PE=2 SV=1
Q91062Vitellogenin OS=Ichthyomyzon unicuspis OX=30308 PE=1 SV=1
P02845Vitellogenin-2 OS=Gallus gallus OX=9031 GN=VTG2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001514 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08742
all species →
C8C8 domainDomainInterproscan
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan
PF06448
all species →
DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF01347
all species →
Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172
all species →
Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011030
all species →
Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR014853
all species →
DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR015819
all species →
Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR015817
all species →
Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015255
all species →
DomainVitellinogen, open beta-sheetInterproscan
IPR050733
all species →
FamilyVitellogenin/ApolipophorinInterproscan
IPR009454
all species →
DomainLipid transport, open beta-sheetInterproscan
IPR001747
all species →
DomainVitellogenin, N-terminalInterproscan
IPR015816
all species →
Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345
all species →
VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →
Molecular Functionlipid transporter activityInterproscan
GO:0006869
all species →
Biological Processlipid transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN00448-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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