Detailed information of ANN00579-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:10240695...10249633
NR annotation: CAH3019966.1, unnamed protein product, partial [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q90610Neogenin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
Q92859Neogenin OS=Homo sapiens OX=9606 GN=NEO1 PE=1 SV=2
P97603Neogenin (Fragment) OS=Rattus norvegicus OX=10116 GN=Neo1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006554 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050467
all species →		FamilyLeucine-rich repeat and fibronectin type-III domain-containingInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000483
all species →		DomainCysteine-rich flanking region, C-terminalInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45842
all species →		SYNAPTIC ADHESION-LIKE MOLECULE SALMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN00579-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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