Detailed information of ANN00735-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:13203907...13209270
NR annotation: XP_020601108.1, dynamin-1-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08DF4Dynamin-1 OS=Bos taurus OX=9913 GN=DNM1 PE=1 SV=1
Q05193Dynamin-1 OS=Homo sapiens OX=9606 GN=DNM1 PE=1 SV=2
P21575Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001302 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02212
all species →
GEDDynamin GTPase effector domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003130
all species →
DomainDynamin GTPase effectorInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR022812
all species →
FamilyDynaminInterproscan
IPR020850
all species →
DomainGTPase effector domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11566
all species →
DYNAMINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005874
all species →
Cellular ComponentmicrotubuleInterproscan
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN00735-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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