Gene detail

Detailed information of ANN00737-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:13237820...13255533
NR annotation: CAH3182447.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN00737-RA

ATGGCCGTCTTGCGTGGAAACTTGTTGCTGTTTCTGGCGATTTATTTGACAAAGGCTCAAGCTCAGGATAATTTTGGGATCGTCGAGCCATTTCCAGAAAACATCTATCCAATTGAGTTCACTTCAGCTCAGGTGACATGTGTGGCTTTTGATTCAAGCGGAGTAAAGACTCCCGACAGAATACAGTTTATGAGGAAAAGTAACTTTGCTATATACACAAAGCTAACAGAGAACGAGAATTTGTACTTTACAAAAAAGCAAGAAGAGGAAATAGGGCAAGATGGCAAACAATTGAAGAAGCTCTTCGTTACTTTGCACATTCGGAATGTAACGTTGGAAGATGATAGCCAATTTGGTCTACTGGGAAGGTACGAGTGCCACGCTTATGCATTCAATGACTCGACAGTGAGGAAGCACGGCTTTACCGTCAATGTTATAAGAAGGGCAGAAATCCCCGGAGTATCTGTCACTAAACCCAGTATTCTACAGCATGGAGATGATGTGACAATTGTTTGCAACTTGACTCAAAGCCAGGGCTTCTCAAACACAGCGCTAAACAGGATATCGTGGTTCAAAAATGGTGTATTATTACAAAGTGTCCGAAACCCTGATCCGAGGAATCCTCGGGATTTCCTGGGACCTCTGGTTTTAAGTAAACTTGGTGTTAAAGATGGAGGCAATTACACCTGTCTTCTTGAAGTGAAGCTACGCAACATAAAAAAACACAACGTGTCAGATTCCACCATGATTGGAATTGCCCCGTGGCTTGATAGACCCGAAGAGGATCCTCAGTTCAAGAAGAATGTAGGAGACAGGGTTTCATTTGTGTGTCCGGCTCAAGGATTTCCTTTGGAAGTTAAATGGAAGGTGCAGAAAATTGAAGGTGCACCAACTTGCATAAGTAAGGGTGATGAATCAGATGGAAAATACCACATTGAGCGCCAGGGAATTTACGACCCTTATGTGCTGACGGTATCTAATCTGCAGTACAGTGATAATGGTATCTACTCCTGCTGCGTTTCCAACAACTGCTCATCAGATCGTACCACTGGAGACTTGTGCCAGCGCTTTTTTCTCCAGATGGTCAACTGGCCAGCTGGTCAGAGTACATCATGCCAAATATACAAGAGTTATCTGTTTGCAATGGTAGTTCTTAGAGCAAACGGCGTGAATGACATTTTAGGACCTTTTTGGAAATTTATGTGCAAAGAATCTGATGTGGTCGATCAGGATAATTTTGGGATCGTCGAGCCACTTCCAGAAAACATCTATCCAATTGAGTTCACTTCAGCTCAGGTGACATGTGTGGCTTTTGATTCAACCGGAATAAAGACTCCCGACAGAATACAGTTTATGAGAAAAAGTAACTTTGCTATATACACAAATATAACAGAGAACGAGAATTTGTACTTTACAAAAAAGCAAGAAGAGGAAATAGGGCATGTAATACGCGTATTAAACTTTGCAGATGGCAAAAAATTGAAGAAGCTCTTCGTTACTTTGCACATTCGGAATGTAACGTTGGAAGATGATAGCCAATTTGGTCTACTGGGAAGGTACGAGTGTCACGCTTATGCATTCAATGACTCGACGGAGAAGAAGCACGGCTTTACCGTCAATGTTATAAGAAGGGCAAAAATCCCCGGAGTATCTGTCACTAGCCCCGGTATTCTACAGCATGGAGATAATGTGACACTTGTTTGTAACTTGACTCAAAGACAGAGTTGGTCAGTGCTGAACAGGATATCGTGGTTCAAAAATGGTGTATTATTACAAAGTGTGCGAAACCCTGACCCGTGGAATCTTCGGGATTTCCTGGGACCTCTGGTTTTAAGAAAACTTGGTGTTAGAGATGGAGGAAAGTACACCTGTCTTCTTGAAGTGAAACTACGCAACAGAAAAAAACACAACGTGTCAGATTCCACCATGATTGGAATTGCCCCGTGGCTTGATAGACCCGAAGAGGATCCTCAGTTCAAGAAGAATGTAGGAGACAGGGTTTCATTTGTGTGTCCGGCTCAAGGATTTCCTTTGGAAGTTGAATGGAAGGTGCAGAAAATTGAAGGTGCACCAACTTGCATAAGTAAGGGTGGTAAGCCTATTAGTATTGTATTTTGGCGCATGTTGGTTTATCAATGGAGTTGA

Transcript

ANN00737-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23593	A2ML; alpha-2-macroglobulin-like protein	-	Peptidases and inhibitors	ko01002	deepkoala