Gene detail

Detailed information of ANN01075-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:19664394...19669448
NR annotation: XP_015773690.1, PREDICTED: paired box protein Pax-3-B-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P09082	Protein gooseberry OS=Drosophila melanogaster OX=7227 GN=gsb PE=2 SV=1
P23760	Paired box protein Pax-3 OS=Homo sapiens OX=9606 GN=PAX3 PE=1 SV=2
P24610	Paired box protein Pax-3 OS=Mus musculus OX=10090 GN=Pax3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00292	PAX	'Paired box' domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR043565	Family	PAX family	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR001523	Domain	Paired domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan