Gene detail

Detailed information of ANN01197-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:21552101...21565260
NR annotation: XP_020625966.1, geranylgeranyl transferase type-1 subunit beta-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5EAD5	Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus OX=9913 GN=PGGT1B PE=2 SV=1
P53609	Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens OX=9606 GN=PGGT1B PE=1 SV=2
Q8BUY9	Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus OX=10090 GN=Pggt1b PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00432	Prenyltrans	Prenyltransferase and squalene oxidase repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041960	Family	Geranylgeranyl transferase type-1 subunit beta	Interproscan
IPR001330	Repeat	PFTB repeat	Interproscan
IPR045089	Family	Prenyltransferase subunit beta	Interproscan
IPR008930	Homologous_superfamily	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11774	GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004661	Molecular Function	protein geranylgeranyltransferase activity	Interproscan
GO:0005953	Cellular Component	CAAX-protein geranylgeranyltransferase complex	Interproscan
GO:0018344	Biological Process	protein geranylgeranylation	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004662	Molecular Function	CAAX-protein geranylgeranyltransferase activity	Interproscan
GO:0008318	Molecular Function	protein prenyltransferase activity	Interproscan
GO:0018342	Biological Process	protein prenylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11713	PGTB1; geranylgeranyl transferase type-1 subunit beta	EC:2.5.1.59	Prenyltransferases	ko01006	deepkoala